PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC048785.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 318aa    MW: 35312 Da    PI: 5.1144
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC048785.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.1e-11133176755
                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  EcC048785.10 133 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYMQELQ 176
                   67*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-16126193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.275126175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-16128191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.62E-12128178No hitNo description
SMARTSM003533.8E-14132181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-8133176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MDRIDHSKNL LMNSDDFEPP YFIEGDNFNQ MINLIQGESV HPIMKLGFES ALLDGVMSGG  60
QVMPTAGNAF GYDRTSSINC DFVLDSLPSL GRDVMENLED ENDEEDSSGT TTTTATATTP  120
TKRTKTDRSR TLISERRRRG RMKEKLYALR SLVPNITKMD KASIVGDAVL YMQELQTQAK  180
KLKAEIASLE ASWAGTGLKT YQAQDETTKR IQAANSNHPV CRKILQMDVF QVEERGFYVR  240
LVCPKGAGVA ASLYKALESL NSFQVQNSNL ATASERFVFT FTLNVKESEQ DTTLPDLKLW  300
IAGALLNQGF EVKPPLSA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045304.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
SwissprotQ0V7X45e-94FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLA0A059DAQ40.0A0A059DAQ4_EUCGR; Uncharacterized protein
STRINGVIT_06s0061g00720.t011e-105(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM41872857
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-70FER-like regulator of iron uptake